Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nudcd3Q8R1N4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nudcd3Q8R1N4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nudcd3Q8R1N4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nudcd3Q8R1N4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Nudcd3Q8R1N4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Gm27920-201ENSMUST00000183953 96 ntBASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Gm18041-201ENSMUST00000218210 618 ntBASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd3Q8R1N4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Mir5131-201ENSMUST00000175426 93 ntBASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Gm7461-201ENSMUST00000058918 827 ntBASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd3Q8R1N4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Gm25925-201ENSMUST00000158314 306 ntBASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd3Q8R1N4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms