Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn1Q8K445 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn1Q8K445 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.18□□□□□ -0.3
Clrn1Q8K445 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.18□□□□□ -0.3
Clrn1Q8K445 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Clrn1Q8K445 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn1Q8K445 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn1Q8K445 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.18□□□□□ -0.3
Clrn1Q8K445 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.17□□□□□ -0.3
Clrn1Q8K445 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.17□□□□□ -0.3
Clrn1Q8K445 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.17□□□□□ -0.3
Clrn1Q8K445 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.17□□□□□ -0.3
Clrn1Q8K445 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn1Q8K445 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Gm14767-201ENSMUST00000121559 586 ntBASIC13.16□□□□□ -0.3
Clrn1Q8K445 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Gm9229-201ENSMUST00000222777 126 ntBASIC13.16□□□□□ -0.3
Clrn1Q8K445 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clrn1Q8K445 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.16□□□□□ -0.3
Clrn1Q8K445 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.15□□□□□ -0.3
Clrn1Q8K445 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms