Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Gm29541-201ENSMUST00000191351 678 ntBASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Gm44335-201ENSMUST00000196879 141 ntBASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Gm44297-201ENSMUST00000198304 141 ntBASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Gm44346-201ENSMUST00000198851 141 ntBASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Cchcr1Q8K2I2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Gm24158-201ENSMUST00000175263 71 ntBASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Gm29741-201ENSMUST00000192667 421 ntBASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Gm43474-201ENSMUST00000196415 774 ntBASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Gm44719-201ENSMUST00000206404 149 ntBASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cchcr1Q8K2I2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Gm37714-201ENSMUST00000194742 342 ntBASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms