Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.33□□□□□ -0.28
CroccQ8CJ40 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Gm7775-201ENSMUST00000218871 853 ntBASIC13.33□□□□□ -0.28
CroccQ8CJ40 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CroccQ8CJ40 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Gm42612-201ENSMUST00000197986 623 ntBASIC13.32□□□□□ -0.28
CroccQ8CJ40 Gm43170-201ENSMUST00000199827 612 ntBASIC13.32□□□□□ -0.28
CroccQ8CJ40 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Gm7730-201ENSMUST00000212486 454 ntBASIC13.32□□□□□ -0.28
CroccQ8CJ40 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.32□□□□□ -0.28
CroccQ8CJ40 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.32□□□□□ -0.28
CroccQ8CJ40 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.32□□□□□ -0.28
CroccQ8CJ40 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Gm4875-201ENSMUST00000118257 786 ntBASIC13.32□□□□□ -0.28
CroccQ8CJ40 Gm14719-201ENSMUST00000121891 340 ntBASIC13.32□□□□□ -0.28
CroccQ8CJ40 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CroccQ8CJ40 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Gm27306-201ENSMUST00000183970 107 ntBASIC13.31□□□□□ -0.28
CroccQ8CJ40 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.31□□□□□ -0.28
CroccQ8CJ40 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.31□□□□□ -0.28
CroccQ8CJ40 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CroccQ8CJ40 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms