Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip4Q8CI96 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip4Q8CI96 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip4Q8CI96 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip4Q8CI96 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip4Q8CI96 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip4Q8CI96 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip4Q8CI96 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.06□□□□□ -0.16
Clip4Q8CI96 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip4Q8CI96 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gm8410-201ENSMUST00000117225 605 ntBASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gm13823-201ENSMUST00000119930 345 ntBASIC14.05□□□□□ -0.16
Clip4Q8CI96 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gm37230-201ENSMUST00000194491 818 ntBASIC14.05□□□□□ -0.16
Clip4Q8CI96 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.05□□□□□ -0.16
Clip4Q8CI96 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms