Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.99■□□□□ 0.15
Smc2Q8CG48 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.99■□□□□ 0.15
Smc2Q8CG48 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Gm5312-201ENSMUST00000203728 547 ntBASIC15.99■□□□□ 0.15
Smc2Q8CG48 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc2Q8CG48 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Gm7774-201ENSMUST00000200064 533 ntBASIC15.98■□□□□ 0.15
Smc2Q8CG48 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.98■□□□□ 0.15
Smc2Q8CG48 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc2Q8CG48 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.98■□□□□ 0.15
Smc2Q8CG48 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.97■□□□□ 0.15
Smc2Q8CG48 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Rubie-203ENSMUST00000227803 2430 ntBASIC15.97■□□□□ 0.15
Smc2Q8CG48 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.97■□□□□ 0.15
Smc2Q8CG48 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc2Q8CG48 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc2Q8CG48 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smc2Q8CG48 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc2Q8CG48 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.96■□□□□ 0.15
Smc2Q8CG48 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smc2Q8CG48 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Smc2Q8CG48 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc2Q8CG48 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc2Q8CG48 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc2Q8CG48 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Smc2Q8CG48 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.96■□□□□ 0.15
Smc2Q8CG48 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.96■□□□□ 0.15
Smc2Q8CG48 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc2Q8CG48 Gm27702-201ENSMUST00000184512 56 ntBASIC15.96■□□□□ 0.15
Smc2Q8CG48 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc2Q8CG48 Gm18027-201ENSMUST00000218947 619 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms