Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Chchd1-203ENSMUST00000224633 557 ntBASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Gm17968-201ENSMUST00000194902 784 ntBASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lrif1Q8CDD9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Gm25925-201ENSMUST00000158314 306 ntBASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Gm45747-201ENSMUST00000212203 999 ntBASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Lrif1Q8CDD9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lrif1Q8CDD9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lrif1Q8CDD9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lrif1Q8CDD9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lrif1Q8CDD9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Lrif1Q8CDD9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lrif1Q8CDD9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lrif1Q8CDD9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms