Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Mir497b-201ENSMUST00000093601 125 ntBASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf31Q8CCF0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Gm8515-201ENSMUST00000194852 576 ntBASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Gm18905-201ENSMUST00000205454 928 ntBASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf31Q8CCF0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Gm12091-201ENSMUST00000146791 830 ntBASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Gm8584-201ENSMUST00000171982 758 ntBASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Gm9908-201ENSMUST00000211534 448 ntBASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Gm7653-201ENSMUST00000214567 508 ntBASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf31Q8CCF0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Gm5186-201ENSMUST00000218781 920 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms