Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Rpph1-201ENSMUST00000175096 319 ntBASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd4Q8CC84 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Gm18733-201ENSMUST00000173950 856 ntBASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd4Q8CC84 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms