Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Mir6956-201ENSMUST00000183598 62 ntBASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trerf1Q8BXJ2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Gm13015-201ENSMUST00000118674 204 ntBASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Gm9824-201ENSMUST00000178707 561 ntBASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trerf1Q8BXJ2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.74□□□□□ -0.05
Trerf1Q8BXJ2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms