Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp40Q8BWR4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp40Q8BWR4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp40Q8BWR4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp40Q8BWR4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp40Q8BWR4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp40Q8BWR4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp40Q8BWR4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp40Q8BWR4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Gm18473-201ENSMUST00000220543 868 ntBASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Gm8598-201ENSMUST00000221184 836 ntBASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp40Q8BWR4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp40Q8BWR4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp40Q8BWR4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp40Q8BWR4 Gm13730-201ENSMUST00000121036 1462 ntBASIC19.02■□□□□ 0.63
Usp40Q8BWR4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp40Q8BWR4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp40Q8BWR4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp40Q8BWR4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Gm12957-201ENSMUST00000117835 377 ntBASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Gm14660-201ENSMUST00000119809 575 ntBASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Gm45784-201ENSMUST00000188360 142 ntBASIC19.01■□□□□ 0.63
Usp40Q8BWR4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 AC140451.2-201ENSMUST00000228030 664 ntBASIC19.01■□□□□ 0.63
Usp40Q8BWR4 AC122459.1-201ENSMUST00000228373 885 ntBASIC19.01■□□□□ 0.63
Usp40Q8BWR4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp40Q8BWR4 Gm13050-201ENSMUST00000122149 1345 ntBASIC19■□□□□ 0.63
Usp40Q8BWR4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Usp40Q8BWR4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC19■□□□□ 0.63
Usp40Q8BWR4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC19■□□□□ 0.63
Usp40Q8BWR4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC19■□□□□ 0.63
Usp40Q8BWR4 Gm29649-201ENSMUST00000185649 419 ntBASIC19■□□□□ 0.63
Usp40Q8BWR4 Gm42442-201ENSMUST00000197951 1133 ntBASIC19■□□□□ 0.63
Usp40Q8BWR4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC19■□□□□ 0.63
Usp40Q8BWR4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC19■□□□□ 0.63
Usp40Q8BWR4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Usp40Q8BWR4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp40Q8BWR4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Usp40Q8BWR4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC19■□□□□ 0.63
Usp40Q8BWR4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Gm11803-201ENSMUST00000119966 444 ntBASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Gm29608-201ENSMUST00000190444 463 ntBASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp40Q8BWR4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms