Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp54Q8BL06 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Usp54Q8BL06 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Gm15889-202ENSMUST00000212669 2443 ntBASIC19.46■□□□□ 0.71
Usp54Q8BL06 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Gm13297-201ENSMUST00000120205 934 ntBASIC19.46■□□□□ 0.71
Usp54Q8BL06 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Usp54Q8BL06 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp54Q8BL06 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC19.45■□□□□ 0.7
Usp54Q8BL06 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp54Q8BL06 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp54Q8BL06 Gm24548-201ENSMUST00000158650 108 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Gm7118-201ENSMUST00000200167 1003 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Gm32025-201ENSMUST00000217960 307 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 AC093022.1-201ENSMUST00000226949 1072 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 AC132317.1-201ENSMUST00000227227 962 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Gm12500-202ENSMUST00000186471 2428 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Gm38049-201ENSMUST00000195698 1372 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp54Q8BL06 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Gm24255-201ENSMUST00000104481 128 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 Mir877-201ENSMUST00000104738 85 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 Gm5781-201ENSMUST00000219792 443 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 AC173210.1-201ENSMUST00000222341 1131 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC19.44■□□□□ 0.7
Usp54Q8BL06 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Usp54Q8BL06 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Gm11964-201ENSMUST00000120982 444 ntBASIC19.43■□□□□ 0.7
Usp54Q8BL06 Gm2231-201ENSMUST00000125661 612 ntBASIC19.43■□□□□ 0.7
Usp54Q8BL06 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC19.43■□□□□ 0.7
Usp54Q8BL06 Gm37042-201ENSMUST00000193816 581 ntBASIC19.43■□□□□ 0.7
Usp54Q8BL06 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp54Q8BL06 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms