Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc40Q8BI79 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc40Q8BI79 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm12882-201ENSMUST00000121696 517 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm9824-201ENSMUST00000178707 561 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm29310-201ENSMUST00000185468 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21825-201ENSMUST00000185728 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm29109-201ENSMUST00000185895 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21896-201ENSMUST00000186520 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21873-201ENSMUST00000186728 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21794-201ENSMUST00000187056 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21880-201ENSMUST00000187275 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21826-201ENSMUST00000187451 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21198-201ENSMUST00000188393 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21749-201ENSMUST00000189343 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21901-201ENSMUST00000189568 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm29424-201ENSMUST00000189716 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm28599-201ENSMUST00000189838 694 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21867-201ENSMUST00000189917 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm29269-201ENSMUST00000190087 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21722-201ENSMUST00000190153 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm28423-201ENSMUST00000190701 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21899-201ENSMUST00000190745 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21910-201ENSMUST00000191163 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21849-201ENSMUST00000191571 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm28678-201ENSMUST00000191593 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm20910-201ENSMUST00000193268 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm21871-201ENSMUST00000194621 696 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gm43125-201ENSMUST00000201724 730 ntBASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc40Q8BI79 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Gm14822-201ENSMUST00000122247 291 ntBASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Gm18049-201ENSMUST00000208909 581 ntBASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc40Q8BI79 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms