Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf38Q8BI21 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm11025-201ENSMUST00000140773 466 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm29310-201ENSMUST00000185468 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21825-201ENSMUST00000185728 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm29109-201ENSMUST00000185895 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21896-201ENSMUST00000186520 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21873-201ENSMUST00000186728 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21794-201ENSMUST00000187056 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21880-201ENSMUST00000187275 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21826-201ENSMUST00000187451 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21198-201ENSMUST00000188393 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21749-201ENSMUST00000189343 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21901-201ENSMUST00000189568 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm29424-201ENSMUST00000189716 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm28599-201ENSMUST00000189838 694 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21867-201ENSMUST00000189917 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm29269-201ENSMUST00000190087 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21722-201ENSMUST00000190153 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm28423-201ENSMUST00000190701 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21899-201ENSMUST00000190745 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21910-201ENSMUST00000191163 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21849-201ENSMUST00000191571 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm28678-201ENSMUST00000191593 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm20910-201ENSMUST00000193268 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm21871-201ENSMUST00000194621 696 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gm45612-201ENSMUST00000211320 160 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf38Q8BI21 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Rnf38Q8BI21 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf38Q8BI21 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf38Q8BI21 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf38Q8BI21 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf38Q8BI21 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf38Q8BI21 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf38Q8BI21 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf38Q8BI21 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms