Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Gm38225-201ENSMUST00000194001 393 ntBASIC11.73□□□□□ -0.53
Smim12Q78RX3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.73□□□□□ -0.53
Smim12Q78RX3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smim12Q78RX3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Gm29741-201ENSMUST00000192667 421 ntBASIC11.72□□□□□ -0.53
Smim12Q78RX3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.72□□□□□ -0.53
Smim12Q78RX3 Gm20553-201ENSMUST00000204205 844 ntBASIC11.72□□□□□ -0.53
Smim12Q78RX3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Gm10819-201ENSMUST00000099988 561 ntBASIC11.72□□□□□ -0.53
Smim12Q78RX3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim12Q78RX3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.71□□□□□ -0.53
Smim12Q78RX3 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.71□□□□□ -0.53
Smim12Q78RX3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.71□□□□□ -0.53
Smim12Q78RX3 Gm17271-201ENSMUST00000165535 355 ntBASIC11.71□□□□□ -0.53
Smim12Q78RX3 Mir3113-201ENSMUST00000175478 76 ntBASIC11.71□□□□□ -0.53
Smim12Q78RX3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.71□□□□□ -0.53
Smim12Q78RX3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smim12Q78RX3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.71□□□□□ -0.54
Smim12Q78RX3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms