Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Gm20949-201ENSMUST00000206478 952 ntBASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Auts2-212ENSMUST00000178555 309 ntBASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Gm27306-201ENSMUST00000183970 107 ntBASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Casc4Q6P2L7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Gm27989-201ENSMUST00000184721 107 ntBASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.12□□□□□ -0.15
Casc4Q6P2L7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Casc4Q6P2L7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms