Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Gm12134-201ENSMUST00000122109 520 ntBASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Morn2-202ENSMUST00000227729 656 ntBASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slx4Q6P1D7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Mospd4-201ENSMUST00000180618 576 ntBASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Gm12620-201ENSMUST00000119791 1986 ntBASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Gm12612-201ENSMUST00000140182 1986 ntBASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Gm16372-201ENSMUST00000073088 450 ntBASIC21.06■□□□□ 0.96
Slx4Q6P1D7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm24830-201ENSMUST00000102024 166 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm11222-201ENSMUST00000119005 738 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm11637-201ENSMUST00000120601 592 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm25890-201ENSMUST00000177643 165 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm22614-201ENSMUST00000178300 165 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm27341-201ENSMUST00000183570 106 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm44069-201ENSMUST00000204898 506 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm5781-201ENSMUST00000219792 443 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm22042-201ENSMUST00000082989 165 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm26232-201ENSMUST00000083360 166 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm24136-201ENSMUST00000083374 165 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Gm26110-201ENSMUST00000083971 165 ntBASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Slx4Q6P1D7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms