Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim27Q62158 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim27Q62158 Gm12151-201ENSMUST00000121374 290 ntBASIC17.1■□□□□ 0.33
Trim27Q62158 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Trim27Q62158 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim27Q62158 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim27Q62158 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim27Q62158 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim27Q62158 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.1■□□□□ 0.33
Trim27Q62158 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim27Q62158 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim27Q62158 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim27Q62158 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim27Q62158 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim27Q62158 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim27Q62158 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim27Q62158 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.09■□□□□ 0.33
Trim27Q62158 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim27Q62158 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Gm4804-201ENSMUST00000182234 999 ntBASIC17.09■□□□□ 0.33
Trim27Q62158 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim27Q62158 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim27Q62158 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.09■□□□□ 0.33
Trim27Q62158 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.09■□□□□ 0.33
Trim27Q62158 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim27Q62158 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.09■□□□□ 0.33
Trim27Q62158 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim27Q62158 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trim27Q62158 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim27Q62158 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim27Q62158 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim27Q62158 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim27Q62158 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim27Q62158 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim27Q62158 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim27Q62158 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim27Q62158 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 Gm15240-201ENSMUST00000118156 720 ntBASIC17.08■□□□□ 0.32
Trim27Q62158 Gm15487-201ENSMUST00000122373 465 ntBASIC17.08■□□□□ 0.32
Trim27Q62158 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim27Q62158 Gm27989-201ENSMUST00000184721 107 ntBASIC17.08■□□□□ 0.32
Trim27Q62158 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.08■□□□□ 0.32
Trim27Q62158 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim27Q62158 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim27Q62158 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim27Q62158 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim27Q62158 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim27Q62158 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.07■□□□□ 0.32
Trim27Q62158 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim27Q62158 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim27Q62158 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms