Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Rai1Q61818 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.28□□□□□ -0.28
Rai1Q61818 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rai1Q61818 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rai1Q61818 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.28□□□□□ -0.28
Rai1Q61818 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rai1Q61818 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Rai1Q61818 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.27□□□□□ -0.28
Rai1Q61818 Gm16479-201ENSMUST00000121706 932 ntBASIC13.27□□□□□ -0.28
Rai1Q61818 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.27□□□□□ -0.28
Rai1Q61818 Gm27243-201ENSMUST00000183964 521 ntBASIC13.27□□□□□ -0.28
Rai1Q61818 Gm29396-201ENSMUST00000185659 716 ntBASIC13.27□□□□□ -0.28
Rai1Q61818 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.27□□□□□ -0.28
Rai1Q61818 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.27□□□□□ -0.28
Rai1Q61818 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Rai1Q61818 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.27□□□□□ -0.28
Rai1Q61818 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Rai1Q61818 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.27□□□□□ -0.28
Rai1Q61818 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.27□□□□□ -0.28
Rai1Q61818 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rai1Q61818 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rai1Q61818 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.27□□□□□ -0.29
Rai1Q61818 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.27□□□□□ -0.29
Rai1Q61818 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rai1Q61818 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Rai1Q61818 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.27□□□□□ -0.29
Rai1Q61818 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.27□□□□□ -0.29
Rai1Q61818 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.27□□□□□ -0.29
Rai1Q61818 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Gm27501-201ENSMUST00000183599 107 ntBASIC13.27□□□□□ -0.29
Rai1Q61818 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.27□□□□□ -0.29
Rai1Q61818 Gm37497-201ENSMUST00000195830 798 ntBASIC13.27□□□□□ -0.29
Rai1Q61818 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.27□□□□□ -0.29
Rai1Q61818 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rai1Q61818 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.27□□□□□ -0.29
Rai1Q61818 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rai1Q61818 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Rai1Q61818 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.26□□□□□ -0.29
Rai1Q61818 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.26□□□□□ -0.29
Rai1Q61818 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.26□□□□□ -0.29
Rai1Q61818 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.26□□□□□ -0.29
Rai1Q61818 Gm7783-201ENSMUST00000204795 781 ntBASIC13.26□□□□□ -0.29
Rai1Q61818 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rai1Q61818 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms