Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Foxc1Q61572 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Foxc1Q61572 Gm8410-201ENSMUST00000117225 605 ntBASIC10.38□□□□□ -0.75
Foxc1Q61572 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Foxc1Q61572 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.38□□□□□ -0.75
Foxc1Q61572 Gm25025-201ENSMUST00000175018 111 ntBASIC10.38□□□□□ -0.75
Foxc1Q61572 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Gm27622-201ENSMUST00000183779 60 ntBASIC10.38□□□□□ -0.75
Foxc1Q61572 Gm37002-201ENSMUST00000194560 373 ntBASIC10.38□□□□□ -0.75
Foxc1Q61572 Gm37709-201ENSMUST00000195074 600 ntBASIC10.38□□□□□ -0.75
Foxc1Q61572 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Olfr286-202ENSMUST00000205305 969 ntBASIC10.38□□□□□ -0.75
Foxc1Q61572 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Foxc1Q61572 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Foxc1Q61572 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Foxc1Q61572 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.38□□□□□ -0.75
Foxc1Q61572 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Foxc1Q61572 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Foxc1Q61572 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc1Q61572 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Foxc1Q61572 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.37□□□□□ -0.75
Foxc1Q61572 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Gm14579-201ENSMUST00000117068 283 ntBASIC10.37□□□□□ -0.75
Foxc1Q61572 Gm24380-201ENSMUST00000122696 324 ntBASIC10.37□□□□□ -0.75
Foxc1Q61572 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Gm18049-201ENSMUST00000208909 581 ntBASIC10.37□□□□□ -0.75
Foxc1Q61572 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.37□□□□□ -0.75
Foxc1Q61572 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Foxc1Q61572 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc1Q61572 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Foxc1Q61572 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Foxc1Q61572 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Foxc1Q61572 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Foxc1Q61572 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Foxc1Q61572 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.36□□□□□ -0.75
Foxc1Q61572 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Foxc1Q61572 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Foxc1Q61572 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.36□□□□□ -0.75
Foxc1Q61572 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Foxc1Q61572 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms