Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm12176-201ENSMUST00000121420 875 ntBASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Sybu-209ENSMUST00000228639 4113 ntBASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm38341-201ENSMUST00000195357 515 ntBASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm43094-201ENSMUST00000196549 921 ntBASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ccdc88aQ5SNZ0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm12928-201ENSMUST00000117115 573 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm29199-201ENSMUST00000187766 775 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm43133-201ENSMUST00000197472 463 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm8927-201ENSMUST00000181978 981 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm27847-201ENSMUST00000183711 107 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm27375-201ENSMUST00000183799 107 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm3222-201ENSMUST00000071282 990 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.86■□□□□ 0.13
Ccdc88aQ5SNZ0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.85■□□□□ 0.13
Ccdc88aQ5SNZ0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ccdc88aQ5SNZ0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc88aQ5SNZ0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc88aQ5SNZ0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc88aQ5SNZ0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc88aQ5SNZ0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc88aQ5SNZ0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc88aQ5SNZ0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc88aQ5SNZ0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms