Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm5566-201ENSMUST00000116118 459 ntBASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Gm37935-201ENSMUST00000192012 982 ntBASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Gm10253-201ENSMUST00000194270 940 ntBASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Gm7774-201ENSMUST00000200064 533 ntBASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Gm5312-201ENSMUST00000203728 547 ntBASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5d-4Q5R1F6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Gm43575-201ENSMUST00000196420 516 ntBASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Gm43073-201ENSMUST00000198200 1189 ntBASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5d-4Q5R1F6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Gm23935-201ENSMUST00000102303 57 ntBASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Gm24270-201ENSMUST00000102326 57 ntBASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Gm24245-201ENSMUST00000157318 57 ntBASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trav5d-4Q5R1F6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms