Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3-3Q5R1C3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3-3Q5R1C3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Gm13836-201ENSMUST00000121159 501 ntBASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Gm25745-201ENSMUST00000174945 133 ntBASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Gm18622-201ENSMUST00000219361 595 ntBASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-3Q5R1C3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms