Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Gm38355-201ENSMUST00000192514 1570 ntBASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc27Q3V036 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Gm11594-201ENSMUST00000122313 162 ntBASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Gm11025-201ENSMUST00000140773 466 ntBASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Gm8000-201ENSMUST00000188378 592 ntBASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc27Q3V036 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Gm7114-201ENSMUST00000190159 1789 ntBASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.77■□□□□ 0.44
Ccdc27Q3V036 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Gm10175-201ENSMUST00000086013 645 ntBASIC17.77■□□□□ 0.44
Ccdc27Q3V036 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc27Q3V036 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc27Q3V036 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc27Q3V036 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc27Q3V036 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc27Q3V036 Gm27196-201ENSMUST00000184787 2582 ntBASIC17.77■□□□□ 0.43
Ccdc27Q3V036 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc27Q3V036 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc27Q3V036 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Gm10275-202ENSMUST00000168697 495 ntBASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Gm5264-201ENSMUST00000190584 848 ntBASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Gm10275-201ENSMUST00000092620 635 ntBASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc27Q3V036 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms