Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim40Q3UWA4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.08□□□□□ -0.31
Trim40Q3UWA4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Gm45747-201ENSMUST00000212203 999 ntBASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim40Q3UWA4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Mir8098-201ENSMUST00000184011 137 ntBASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Gm45098-201ENSMUST00000207179 657 ntBASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim40Q3UWA4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Gm13036-201ENSMUST00000117799 748 ntBASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Gm10275-202ENSMUST00000168697 495 ntBASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Gm10275-201ENSMUST00000092620 635 ntBASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim40Q3UWA4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms