Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Mir5122-201ENSMUST00000175004 89 ntBASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Gm27011-201ENSMUST00000182352 972 ntBASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 AC127349.1-201ENSMUST00000224590 266 ntBASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 AC112142.1-201ENSMUST00000228796 918 ntBASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cks1brtQ3UNC9 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Gm8495-201ENSMUST00000188740 694 ntBASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 AC154595.3-201ENSMUST00000224579 384 ntBASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Vti1a-206ENSMUST00000225529 1244 ntBASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cks1brtQ3UNC9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms