Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Gm13464-201ENSMUST00000119418 935 ntBASIC13.02□□□□□ -0.33
Emx1Q04742 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Emx1Q04742 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.02□□□□□ -0.33
Emx1Q04742 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Emx1Q04742 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Emx1Q04742 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Emx1Q04742 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Emx1Q04742 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Emx1Q04742 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Emx1Q04742 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Emx1Q04742 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Emx1Q04742 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.01□□□□□ -0.33
Emx1Q04742 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.01□□□□□ -0.33
Emx1Q04742 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Gm13365-201ENSMUST00000121188 973 ntBASIC13.01□□□□□ -0.33
Emx1Q04742 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.01□□□□□ -0.33
Emx1Q04742 Rprl2-201ENSMUST00000157150 290 ntBASIC13.01□□□□□ -0.33
Emx1Q04742 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Gm44335-201ENSMUST00000196879 141 ntBASIC13.01□□□□□ -0.33
Emx1Q04742 Gm44297-201ENSMUST00000198304 141 ntBASIC13.01□□□□□ -0.33
Emx1Q04742 Gm44346-201ENSMUST00000198851 141 ntBASIC13.01□□□□□ -0.33
Emx1Q04742 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Emx1Q04742 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.01□□□□□ -0.33
Emx1Q04742 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.01□□□□□ -0.33
Emx1Q04742 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Emx1Q04742 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.01□□□□□ -0.33
Emx1Q04742 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Emx1Q04742 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Emx1Q04742 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Emx1Q04742 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Gm37795-201ENSMUST00000194216 2459 ntBASIC13□□□□□ -0.33
Emx1Q04742 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Emx1Q04742 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Emx1Q04742 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13□□□□□ -0.33
Emx1Q04742 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Emx1Q04742 Gm13332-201ENSMUST00000120451 1398 ntBASIC13□□□□□ -0.33
Emx1Q04742 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13□□□□□ -0.33
Emx1Q04742 Gm6226-201ENSMUST00000117765 1146 ntBASIC13□□□□□ -0.33
Emx1Q04742 Gm15593-201ENSMUST00000122085 1008 ntBASIC13□□□□□ -0.33
Emx1Q04742 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13□□□□□ -0.33
Emx1Q04742 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13□□□□□ -0.33
Emx1Q04742 AA543401-201ENSMUST00000164248 1269 ntBASIC13□□□□□ -0.33
Emx1Q04742 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Emx1Q04742 Thap2-203ENSMUST00000218989 527 ntBASIC13□□□□□ -0.33
Emx1Q04742 Gm18246-201ENSMUST00000221023 728 ntBASIC13□□□□□ -0.33
Emx1Q04742 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Emx1Q04742 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms