Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Gm18041-201ENSMUST00000218210 618 ntBASIC13.19□□□□□ -0.3
Apoa1Q00623 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.19□□□□□ -0.3
Apoa1Q00623 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Apoa1Q00623 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Apoa1Q00623 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.19□□□□□ -0.3
Apoa1Q00623 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Apoa1Q00623 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Apoa1Q00623 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Apoa1Q00623 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Apoa1Q00623 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Apoa1Q00623 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Apoa1Q00623 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Apoa1Q00623 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Apoa1Q00623 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.18□□□□□ -0.3
Apoa1Q00623 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Apoa1Q00623 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Apoa1Q00623 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.18□□□□□ -0.3
Apoa1Q00623 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Apoa1Q00623 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Apoa1Q00623 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.18□□□□□ -0.3
Apoa1Q00623 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.18□□□□□ -0.3
Apoa1Q00623 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Gm6973-201ENSMUST00000117080 721 ntBASIC13.18□□□□□ -0.3
Apoa1Q00623 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.18□□□□□ -0.3
Apoa1Q00623 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Apoa1Q00623 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Apoa1Q00623 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Apoa1Q00623 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.17□□□□□ -0.3
Apoa1Q00623 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Apoa1Q00623 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.17□□□□□ -0.3
Apoa1Q00623 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.17□□□□□ -0.3
Apoa1Q00623 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.17□□□□□ -0.3
Apoa1Q00623 Gm11543-201ENSMUST00000120758 370 ntBASIC13.17□□□□□ -0.3
Apoa1Q00623 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.17□□□□□ -0.3
Apoa1Q00623 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Apoa1Q00623 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.17□□□□□ -0.3
Apoa1Q00623 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Apoa1Q00623 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.16□□□□□ -0.3
Apoa1Q00623 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.16□□□□□ -0.3
Apoa1Q00623 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Apoa1Q00623 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Apoa1Q00623 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Gm15957-201ENSMUST00000118893 974 ntBASIC13.16□□□□□ -0.3
Apoa1Q00623 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Apoa1Q00623 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.16□□□□□ -0.3
Apoa1Q00623 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms