Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npas1P97459 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npas1P97459 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Npas1P97459 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npas1P97459 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Npas1P97459 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npas1P97459 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npas1P97459 Gm15173-201ENSMUST00000122049 433 ntBASIC11.71□□□□□ -0.53
Npas1P97459 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Npas1P97459 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.71□□□□□ -0.53
Npas1P97459 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Npas1P97459 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.71□□□□□ -0.53
Npas1P97459 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.71□□□□□ -0.53
Npas1P97459 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npas1P97459 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Npas1P97459 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Npas1P97459 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npas1P97459 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.71□□□□□ -0.54
Npas1P97459 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npas1P97459 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npas1P97459 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npas1P97459 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
Npas1P97459 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npas1P97459 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npas1P97459 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Npas1P97459 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.7□□□□□ -0.54
Npas1P97459 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Npas1P97459 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.7□□□□□ -0.54
Npas1P97459 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Npas1P97459 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.7□□□□□ -0.54
Npas1P97459 Gm7222-201ENSMUST00000117512 906 ntBASIC11.7□□□□□ -0.54
Npas1P97459 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Npas1P97459 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Npas1P97459 Gm7787-201ENSMUST00000216858 688 ntBASIC11.7□□□□□ -0.54
Npas1P97459 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Npas1P97459 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.7□□□□□ -0.54
Npas1P97459 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.7□□□□□ -0.54
Npas1P97459 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.7□□□□□ -0.54
Npas1P97459 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.7□□□□□ -0.54
Npas1P97459 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Npas1P97459 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Npas1P97459 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.69□□□□□ -0.54
Npas1P97459 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.69□□□□□ -0.54
Npas1P97459 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.69□□□□□ -0.54
Npas1P97459 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.69□□□□□ -0.54
Npas1P97459 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.69□□□□□ -0.54
Npas1P97459 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.69□□□□□ -0.54
Npas1P97459 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Npas1P97459 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.69□□□□□ -0.54
Npas1P97459 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.69□□□□□ -0.54
Npas1P97459 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Npas1P97459 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms