Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.77□□□□□ -0.2
Shox2P70390 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Shox2P70390 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Shox2P70390 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.77□□□□□ -0.21
Shox2P70390 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.77□□□□□ -0.21
Shox2P70390 Gm12895-201ENSMUST00000122214 226 ntBASIC13.77□□□□□ -0.21
Shox2P70390 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Shox2P70390 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Shox2P70390 Gm44719-201ENSMUST00000206404 149 ntBASIC13.77□□□□□ -0.21
Shox2P70390 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.77□□□□□ -0.21
Shox2P70390 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.77□□□□□ -0.21
Shox2P70390 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shox2P70390 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Shox2P70390 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.76□□□□□ -0.21
Shox2P70390 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.76□□□□□ -0.21
Shox2P70390 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Shox2P70390 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Shox2P70390 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Shox2P70390 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.76□□□□□ -0.21
Shox2P70390 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.76□□□□□ -0.21
Shox2P70390 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.76□□□□□ -0.21
Shox2P70390 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.76□□□□□ -0.21
Shox2P70390 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.76□□□□□ -0.21
Shox2P70390 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Shox2P70390 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Shox2P70390 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Shox2P70390 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.76□□□□□ -0.21
Shox2P70390 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shox2P70390 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Shox2P70390 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Shox2P70390 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Gm13418-201ENSMUST00000119097 944 ntBASIC13.75□□□□□ -0.21
Shox2P70390 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Shox2P70390 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.75□□□□□ -0.21
Shox2P70390 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Shox2P70390 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Shox2P70390 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.75□□□□□ -0.21
Shox2P70390 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.75□□□□□ -0.21
Shox2P70390 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.75□□□□□ -0.21
Shox2P70390 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.75□□□□□ -0.21
Shox2P70390 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Shox2P70390 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.75□□□□□ -0.21
Shox2P70390 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shox2P70390 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms