Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Smad1P70340 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smad1P70340 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smad1P70340 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smad1P70340 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Smad1P70340 Gm13453-201ENSMUST00000118708 357 ntBASIC14.4□□□□□ -0.1
Smad1P70340 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.4□□□□□ -0.1
Smad1P70340 Gm17837-201ENSMUST00000186435 985 ntBASIC14.4□□□□□ -0.1
Smad1P70340 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.4□□□□□ -0.1
Smad1P70340 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smad1P70340 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smad1P70340 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.39□□□□□ -0.11
Smad1P70340 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.39□□□□□ -0.11
Smad1P70340 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.39□□□□□ -0.11
Smad1P70340 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smad1P70340 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
Smad1P70340 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.39□□□□□ -0.11
Smad1P70340 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smad1P70340 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.39□□□□□ -0.11
Smad1P70340 Gm9182-201ENSMUST00000217829 639 ntBASIC14.39□□□□□ -0.11
Smad1P70340 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Smad1P70340 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.39□□□□□ -0.11
Smad1P70340 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smad1P70340 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Smad1P70340 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Smad1P70340 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smad1P70340 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Gm2810-201ENSMUST00000118681 990 ntBASIC14.38□□□□□ -0.11
Smad1P70340 Gm14042-201ENSMUST00000120139 833 ntBASIC14.38□□□□□ -0.11
Smad1P70340 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.38□□□□□ -0.11
Smad1P70340 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Smad1P70340 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Smad1P70340 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Smad1P70340 Gm9824-201ENSMUST00000178707 561 ntBASIC14.38□□□□□ -0.11
Smad1P70340 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.38□□□□□ -0.11
Smad1P70340 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smad1P70340 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.38□□□□□ -0.11
Smad1P70340 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.38□□□□□ -0.11
Smad1P70340 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms