Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm5566-201ENSMUST00000116118 459 ntBASIC15.35■□□□□ 0.05
Hmgb1P63158 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.35■□□□□ 0.05
Hmgb1P63158 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.35■□□□□ 0.05
Hmgb1P63158 Gm43514-201ENSMUST00000198852 424 ntBASIC15.35■□□□□ 0.05
Hmgb1P63158 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 Mir125a-201ENSMUST00000083545 68 ntBASIC15.35■□□□□ 0.05
Hmgb1P63158 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.35■□□□□ 0.05
Hmgb1P63158 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.35■□□□□ 0.05
Hmgb1P63158 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Hmgb1P63158 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.34■□□□□ 0.05
Hmgb1P63158 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.34■□□□□ 0.05
Hmgb1P63158 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.34■□□□□ 0.05
Hmgb1P63158 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.34■□□□□ 0.05
Hmgb1P63158 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.34■□□□□ 0.05
Hmgb1P63158 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Hmgb1P63158 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.34■□□□□ 0.05
Hmgb1P63158 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgb1P63158 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.34■□□□□ 0.05
Hmgb1P63158 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.34■□□□□ 0.05
Hmgb1P63158 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hmgb1P63158 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.33■□□□□ 0.05
Hmgb1P63158 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hmgb1P63158 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Hmgb1P63158 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Hmgb1P63158 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Hmgb1P63158 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hmgb1P63158 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.33■□□□□ 0.05
Hmgb1P63158 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hmgb1P63158 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.33■□□□□ 0.04
Hmgb1P63158 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.33■□□□□ 0.04
Hmgb1P63158 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Hmgb1P63158 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.33■□□□□ 0.04
Hmgb1P63158 Gm9719-201ENSMUST00000162765 543 ntBASIC15.33■□□□□ 0.04
Hmgb1P63158 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.33■□□□□ 0.04
Hmgb1P63158 Gm43125-201ENSMUST00000201724 730 ntBASIC15.33■□□□□ 0.04
Hmgb1P63158 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.33■□□□□ 0.04
Hmgb1P63158 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgb1P63158 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.33■□□□□ 0.04
Hmgb1P63158 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgb1P63158 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgb1P63158 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgb1P63158 AC107453.4-201ENSMUST00000227068 1817 ntBASIC15.33■□□□□ 0.04
Hmgb1P63158 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.33■□□□□ 0.04
Hmgb1P63158 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgb1P63158 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hmgb1P63158 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Hmgb1P63158 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgb1P63158 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Hmgb1P63158 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.33■□□□□ 0.04
Hmgb1P63158 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgb1P63158 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgb1P63158 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hmgb1P63158 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Hmgb1P63158 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgb1P63158 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgb1P63158 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Hmgb1P63158 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.32■□□□□ 0.04
Hmgb1P63158 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgb1P63158 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgb1P63158 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Gm18027-201ENSMUST00000218947 619 ntBASIC15.32■□□□□ 0.04
Hmgb1P63158 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms