Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.8□□□□□ -0.2
Crnkl1P63154 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.8□□□□□ -0.2
Crnkl1P63154 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.8□□□□□ -0.2
Crnkl1P63154 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Crnkl1P63154 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Crnkl1P63154 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Crnkl1P63154 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Crnkl1P63154 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Crnkl1P63154 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.79□□□□□ -0.2
Crnkl1P63154 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Gm8749-201ENSMUST00000117737 331 ntBASIC13.79□□□□□ -0.2
Crnkl1P63154 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.79□□□□□ -0.2
Crnkl1P63154 Gm9726-201ENSMUST00000180321 678 ntBASIC13.79□□□□□ -0.2
Crnkl1P63154 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.79□□□□□ -0.2
Crnkl1P63154 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Crnkl1P63154 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Crnkl1P63154 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Crnkl1P63154 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.78□□□□□ -0.2
Crnkl1P63154 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Crnkl1P63154 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
Crnkl1P63154 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.78□□□□□ -0.2
Crnkl1P63154 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.78□□□□□ -0.2
Crnkl1P63154 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Gm4899-201ENSMUST00000178708 719 ntBASIC13.78□□□□□ -0.2
Crnkl1P63154 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Crnkl1P63154 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Crnkl1P63154 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Crnkl1P63154 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Crnkl1P63154 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Crnkl1P63154 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms