Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.61□□□□□ -0.55
Lsm5P62322 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Lsm5P62322 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Lsm5P62322 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Lsm5P62322 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.6□□□□□ -0.55
Lsm5P62322 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Lsm5P62322 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.6□□□□□ -0.55
Lsm5P62322 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Lsm5P62322 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Lsm5P62322 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Lsm5P62322 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.6□□□□□ -0.55
Lsm5P62322 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Lsm5P62322 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.6□□□□□ -0.55
Lsm5P62322 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.6□□□□□ -0.55
Lsm5P62322 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.6□□□□□ -0.55
Lsm5P62322 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Lsm5P62322 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lsm5P62322 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Lsm5P62322 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm5P62322 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lsm5P62322 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Lsm5P62322 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Lsm5P62322 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Lsm5P62322 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Lsm5P62322 Gm13418-201ENSMUST00000119097 944 ntBASIC11.59□□□□□ -0.55
Lsm5P62322 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.59□□□□□ -0.55
Lsm5P62322 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.59□□□□□ -0.55
Lsm5P62322 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Lsm5P62322 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.59□□□□□ -0.55
Lsm5P62322 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.59□□□□□ -0.55
Lsm5P62322 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lsm5P62322 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm5P62322 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Lsm5P62322 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lsm5P62322 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lsm5P62322 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lsm5P62322 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms