Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.69□□□□□ -0.38
Lsm3P62311 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm3P62311 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.69□□□□□ -0.38
Lsm3P62311 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lsm3P62311 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lsm3P62311 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Lsm3P62311 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.68□□□□□ -0.38
Lsm3P62311 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.68□□□□□ -0.38
Lsm3P62311 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Lsm3P62311 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Lsm3P62311 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lsm3P62311 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm3P62311 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lsm3P62311 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm3P62311 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Lsm3P62311 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm3P62311 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Lsm3P62311 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm3P62311 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm3P62311 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lsm3P62311 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Lsm3P62311 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.66□□□□□ -0.38
Lsm3P62311 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.66□□□□□ -0.38
Lsm3P62311 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.66□□□□□ -0.38
Lsm3P62311 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lsm3P62311 Gm29257-201ENSMUST00000186115 639 ntBASIC12.66□□□□□ -0.38
Lsm3P62311 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.66□□□□□ -0.38
Lsm3P62311 Gm9682-201ENSMUST00000197505 556 ntBASIC12.66□□□□□ -0.38
Lsm3P62311 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.66□□□□□ -0.38
Lsm3P62311 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Lsm3P62311 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Paupar-201ENSMUST00000194826 3482 ntBASIC12.66□□□□□ -0.38
Lsm3P62311 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lsm3P62311 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Lsm3P62311 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.66□□□□□ -0.38
Lsm3P62311 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms