Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sf3b6P59708 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.38□□□□□ -0.43
Sf3b6P59708 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Sf3b6P59708 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sf3b6P59708 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sf3b6P59708 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sf3b6P59708 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sf3b6P59708 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Sf3b6P59708 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sf3b6P59708 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Mir8117-201ENSMUST00000184773 107 ntBASIC12.37□□□□□ -0.43
Sf3b6P59708 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.37□□□□□ -0.43
Sf3b6P59708 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Gm2213-201ENSMUST00000197485 688 ntBASIC12.37□□□□□ -0.43
Sf3b6P59708 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.37□□□□□ -0.43
Sf3b6P59708 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.37□□□□□ -0.43
Sf3b6P59708 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Sf3b6P59708 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sf3b6P59708 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.36□□□□□ -0.43
Sf3b6P59708 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sf3b6P59708 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Gm11779-201ENSMUST00000118541 368 ntBASIC12.36□□□□□ -0.43
Sf3b6P59708 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.36□□□□□ -0.43
Sf3b6P59708 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.36□□□□□ -0.43
Sf3b6P59708 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.36□□□□□ -0.43
Sf3b6P59708 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.36□□□□□ -0.43
Sf3b6P59708 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Sf3b6P59708 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.36□□□□□ -0.43
Sf3b6P59708 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms