Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Dctn4-202ENSMUST00000223590 1530 ntBASIC18.69■□□□□ 0.58
Nphp4P59240 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Nphp4P59240 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nphp4P59240 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC18.68■□□□□ 0.58
Nphp4P59240 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nphp4P59240 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nphp4P59240 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC18.68■□□□□ 0.58
Nphp4P59240 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nphp4P59240 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.68■□□□□ 0.58
Nphp4P59240 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nphp4P59240 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nphp4P59240 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nphp4P59240 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nphp4P59240 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nphp4P59240 Abhd6-203ENSMUST00000225234 1958 ntBASIC18.67■□□□□ 0.58
Nphp4P59240 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nphp4P59240 Gm11618-201ENSMUST00000117946 267 ntBASIC18.67■□□□□ 0.58
Nphp4P59240 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC18.67■□□□□ 0.58
Nphp4P59240 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC18.67■□□□□ 0.58
Nphp4P59240 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nphp4P59240 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC18.67■□□□□ 0.58
Nphp4P59240 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 Gm10478-201ENSMUST00000084451 396 ntBASIC18.67■□□□□ 0.58
Nphp4P59240 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nphp4P59240 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nphp4P59240 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nphp4P59240 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nphp4P59240 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nphp4P59240 Mmp14-206ENSMUST00000225641 3238 ntBASIC18.67■□□□□ 0.58
Nphp4P59240 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Gm13123-201ENSMUST00000122173 492 ntBASIC18.66■□□□□ 0.58
Nphp4P59240 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Gm7029-201ENSMUST00000173226 450 ntBASIC18.66■□□□□ 0.58
Nphp4P59240 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC18.66■□□□□ 0.58
Nphp4P59240 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC18.66■□□□□ 0.58
Nphp4P59240 Gm37922-201ENSMUST00000195596 455 ntBASIC18.66■□□□□ 0.58
Nphp4P59240 Gm37497-201ENSMUST00000195830 798 ntBASIC18.66■□□□□ 0.58
Nphp4P59240 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Nphp4P59240 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Nphp4P59240 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Nphp4P59240 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.66■□□□□ 0.58
Nphp4P59240 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.66■□□□□ 0.58
Nphp4P59240 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Nphp4P59240 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Nphp4P59240 Gm12384-201ENSMUST00000119228 919 ntBASIC18.66■□□□□ 0.58
Nphp4P59240 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Gm17420-201ENSMUST00000164753 153 ntBASIC18.66■□□□□ 0.58
Nphp4P59240 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Nphp4P59240 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Gm45331-201ENSMUST00000209868 554 ntBASIC18.66■□□□□ 0.58
Nphp4P59240 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nphp4P59240 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nphp4P59240 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC18.65■□□□□ 0.58
Nphp4P59240 Sybu-209ENSMUST00000228639 4113 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms