Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Cdh11P55288 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdh11P55288 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.73□□□□□ -0.37
Cdh11P55288 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.73□□□□□ -0.37
Cdh11P55288 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.73□□□□□ -0.37
Cdh11P55288 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.73□□□□□ -0.37
Cdh11P55288 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cdh11P55288 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdh11P55288 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdh11P55288 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.73□□□□□ -0.37
Cdh11P55288 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdh11P55288 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cdh11P55288 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Cdh11P55288 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cdh11P55288 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cdh11P55288 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdh11P55288 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdh11P55288 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Gm22065-201ENSMUST00000103753 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm22066-201ENSMUST00000103761 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm24932-201ENSMUST00000103763 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm24115-201ENSMUST00000103799 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm22190-201ENSMUST00000103827 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm22191-201ENSMUST00000103831 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm24721-201ENSMUST00000103849 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm28018-201ENSMUST00000103869 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm26399-201ENSMUST00000103937 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdh11P55288 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh11P55288 Gm22175-201ENSMUST00000175007 78 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm25349-201ENSMUST00000177728 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm23616-201ENSMUST00000177797 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm25871-201ENSMUST00000177816 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm24752-201ENSMUST00000178240 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm24496-201ENSMUST00000178287 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm25649-201ENSMUST00000178476 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm25548-201ENSMUST00000178681 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm23147-201ENSMUST00000178841 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm26095-201ENSMUST00000179270 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm22171-201ENSMUST00000179283 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm23936-201ENSMUST00000179354 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm22619-201ENSMUST00000179516 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm25255-201ENSMUST00000179579 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm24755-201ENSMUST00000179691 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm26506-201ENSMUST00000179692 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm25086-201ENSMUST00000179931 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm23243-201ENSMUST00000180047 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm24659-201ENSMUST00000180212 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm24169-201ENSMUST00000180244 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm23689-201ENSMUST00000180354 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm27359-201ENSMUST00000184153 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm27785-201ENSMUST00000184268 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm27466-201ENSMUST00000184396 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm27430-201ENSMUST00000184585 107 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Gm27703-201ENSMUST00000184836 110 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Gm44333-201ENSMUST00000197168 107 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh11P55288 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.72□□□□□ -0.37
Cdh11P55288 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cdh11P55288 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Cdh11P55288 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cdh11P55288 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh11P55288 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms