Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh6P54276 Gm22331-201ENSMUST00000158066 136 ntBASIC17.53■□□□□ 0.4
Msh6P54276 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Msh6P54276 Gm43818-201ENSMUST00000200605 466 ntBASIC17.53■□□□□ 0.4
Msh6P54276 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Gm6013-201ENSMUST00000212264 699 ntBASIC17.53■□□□□ 0.4
Msh6P54276 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.53■□□□□ 0.4
Msh6P54276 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Msh6P54276 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Msh6P54276 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Msh6P54276 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Msh6P54276 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.53■□□□□ 0.4
Msh6P54276 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Msh6P54276 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh6P54276 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Msh6P54276 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.53■□□□□ 0.4
Msh6P54276 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.53■□□□□ 0.4
Msh6P54276 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.53■□□□□ 0.4
Msh6P54276 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.53■□□□□ 0.4
Msh6P54276 Proscos-202ENSMUST00000178990 666 ntBASIC17.53■□□□□ 0.4
Msh6P54276 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh6P54276 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh6P54276 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh6P54276 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh6P54276 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Msh6P54276 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Msh6P54276 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh6P54276 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh6P54276 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Msh6P54276 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.52■□□□□ 0.39
Msh6P54276 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh6P54276 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.52■□□□□ 0.39
Msh6P54276 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh6P54276 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh6P54276 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.52■□□□□ 0.39
Msh6P54276 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.52■□□□□ 0.39
Msh6P54276 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.52■□□□□ 0.39
Msh6P54276 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.52■□□□□ 0.39
Msh6P54276 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.52■□□□□ 0.39
Msh6P54276 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Msh6P54276 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.52■□□□□ 0.39
Msh6P54276 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Msh6P54276 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Msh6P54276 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Msh6P54276 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.51■□□□□ 0.39
Msh6P54276 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Msh6P54276 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Msh6P54276 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Msh6P54276 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Msh6P54276 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.51■□□□□ 0.39
Msh6P54276 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Msh6P54276 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms