Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SftpbP50405 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.27□□□□□ -0.13
SftpbP50405 Gm18737-201ENSMUST00000173594 937 ntBASIC14.27□□□□□ -0.13
SftpbP50405 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.27□□□□□ -0.13
SftpbP50405 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SftpbP50405 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SftpbP50405 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SftpbP50405 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SftpbP50405 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SftpbP50405 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.27□□□□□ -0.13
SftpbP50405 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SftpbP50405 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SftpbP50405 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.27□□□□□ -0.13
SftpbP50405 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SftpbP50405 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SftpbP50405 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.26□□□□□ -0.13
SftpbP50405 Gm15467-201ENSMUST00000120582 445 ntBASIC14.26□□□□□ -0.13
SftpbP50405 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.26□□□□□ -0.13
SftpbP50405 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Gm38225-201ENSMUST00000194001 393 ntBASIC14.26□□□□□ -0.13
SftpbP50405 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.26□□□□□ -0.13
SftpbP50405 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.26□□□□□ -0.13
SftpbP50405 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.26□□□□□ -0.13
SftpbP50405 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SftpbP50405 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.26□□□□□ -0.13
SftpbP50405 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SftpbP50405 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SftpbP50405 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SftpbP50405 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
SftpbP50405 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.25□□□□□ -0.13
SftpbP50405 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.25□□□□□ -0.13
SftpbP50405 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.25□□□□□ -0.13
SftpbP50405 Gm11745-201ENSMUST00000121669 448 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SftpbP50405 Gm29310-201ENSMUST00000185468 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21825-201ENSMUST00000185728 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm29109-201ENSMUST00000185895 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21896-201ENSMUST00000186520 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21873-201ENSMUST00000186728 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21794-201ENSMUST00000187056 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21880-201ENSMUST00000187275 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21826-201ENSMUST00000187451 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21198-201ENSMUST00000188393 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21749-201ENSMUST00000189343 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21901-201ENSMUST00000189568 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm29424-201ENSMUST00000189716 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm28599-201ENSMUST00000189838 694 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21867-201ENSMUST00000189917 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm29269-201ENSMUST00000190087 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21722-201ENSMUST00000190153 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm28423-201ENSMUST00000190701 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21899-201ENSMUST00000190745 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21910-201ENSMUST00000191163 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm21849-201ENSMUST00000191571 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm28678-201ENSMUST00000191593 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm20910-201ENSMUST00000193268 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.25□□□□□ -0.13
SftpbP50405 Gm21871-201ENSMUST00000194621 696 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.25□□□□□ -0.13
SftpbP50405 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.25□□□□□ -0.13
SftpbP50405 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SftpbP50405 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.25□□□□□ -0.13
SftpbP50405 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms