Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LtbrP50284 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.35■□□□□ 0.21
LtbrP50284 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.35■□□□□ 0.21
LtbrP50284 Mir5132-201ENSMUST00000175166 71 ntBASIC16.35■□□□□ 0.21
LtbrP50284 Gm24196-201ENSMUST00000179161 110 ntBASIC16.35■□□□□ 0.21
LtbrP50284 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.35■□□□□ 0.21
LtbrP50284 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.35■□□□□ 0.21
LtbrP50284 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.35■□□□□ 0.21
LtbrP50284 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.35■□□□□ 0.21
LtbrP50284 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LtbrP50284 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LtbrP50284 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.35■□□□□ 0.21
LtbrP50284 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LtbrP50284 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.34■□□□□ 0.21
LtbrP50284 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LtbrP50284 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
LtbrP50284 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.34■□□□□ 0.21
LtbrP50284 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.34■□□□□ 0.21
LtbrP50284 Gm4804-201ENSMUST00000182234 999 ntBASIC16.34■□□□□ 0.21
LtbrP50284 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.34■□□□□ 0.21
LtbrP50284 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC16.34■□□□□ 0.21
LtbrP50284 Gm37714-201ENSMUST00000194742 342 ntBASIC16.34■□□□□ 0.21
LtbrP50284 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.34■□□□□ 0.21
LtbrP50284 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LtbrP50284 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LtbrP50284 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.34■□□□□ 0.21
LtbrP50284 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.34■□□□□ 0.21
LtbrP50284 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.34■□□□□ 0.21
LtbrP50284 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LtbrP50284 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LtbrP50284 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LtbrP50284 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LtbrP50284 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LtbrP50284 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LtbrP50284 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.33■□□□□ 0.2
LtbrP50284 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.33■□□□□ 0.2
LtbrP50284 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LtbrP50284 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.33■□□□□ 0.2
LtbrP50284 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LtbrP50284 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LtbrP50284 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.33■□□□□ 0.2
LtbrP50284 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Gm43818-201ENSMUST00000200605 466 ntBASIC16.33■□□□□ 0.2
LtbrP50284 Gm7783-201ENSMUST00000204795 781 ntBASIC16.33■□□□□ 0.2
LtbrP50284 Gm45930-201ENSMUST00000221330 292 ntBASIC16.33■□□□□ 0.2
LtbrP50284 Gm17872-201ENSMUST00000222550 532 ntBASIC16.33■□□□□ 0.2
LtbrP50284 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LtbrP50284 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LtbrP50284 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.33■□□□□ 0.2
LtbrP50284 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LtbrP50284 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 AC154849.3-201ENSMUST00000223733 1660 ntBASIC16.33■□□□□ 0.2
LtbrP50284 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
LtbrP50284 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.33■□□□□ 0.2
LtbrP50284 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LtbrP50284 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LtbrP50284 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms