Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Gm13036-201ENSMUST00000117799 748 ntBASIC11.56□□□□□ -0.56
Nkx2-1P50220 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.56□□□□□ -0.56
Nkx2-1P50220 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.56□□□□□ -0.56
Nkx2-1P50220 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Gm45098-201ENSMUST00000207179 657 ntBASIC11.56□□□□□ -0.56
Nkx2-1P50220 Gm45747-201ENSMUST00000212203 999 ntBASIC11.56□□□□□ -0.56
Nkx2-1P50220 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.56□□□□□ -0.56
Nkx2-1P50220 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-1P50220 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Mir5126-201ENSMUST00000175513 77 ntBASIC11.55□□□□□ -0.56
Nkx2-1P50220 Gm4899-201ENSMUST00000178708 719 ntBASIC11.55□□□□□ -0.56
Nkx2-1P50220 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.55□□□□□ -0.56
Nkx2-1P50220 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-1P50220 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nkx2-1P50220 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.54□□□□□ -0.56
Nkx2-1P50220 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-1P50220 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms