Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.62□□□□□ -0.55
Abca1P41233 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.62□□□□□ -0.55
Abca1P41233 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Abca1P41233 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Abca1P41233 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.61□□□□□ -0.55
Abca1P41233 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Abca1P41233 Gm13464-201ENSMUST00000119418 935 ntBASIC11.61□□□□□ -0.55
Abca1P41233 Mir1894-201ENSMUST00000122802 81 ntBASIC11.61□□□□□ -0.55
Abca1P41233 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Gm5279-201ENSMUST00000199575 745 ntBASIC11.61□□□□□ -0.55
Abca1P41233 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.61□□□□□ -0.55
Abca1P41233 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.61□□□□□ -0.55
Abca1P41233 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Abca1P41233 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.61□□□□□ -0.55
Abca1P41233 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.61□□□□□ -0.55
Abca1P41233 Gm12390-201ENSMUST00000117897 397 ntBASIC11.61□□□□□ -0.55
Abca1P41233 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Abca1P41233 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abca1P41233 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.6□□□□□ -0.55
Abca1P41233 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.6□□□□□ -0.55
Abca1P41233 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.6□□□□□ -0.55
Abca1P41233 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Abca1P41233 Gm4984-201ENSMUST00000115987 360 ntBASIC11.6□□□□□ -0.55
Abca1P41233 Gm12585-201ENSMUST00000117307 290 ntBASIC11.6□□□□□ -0.55
Abca1P41233 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Abca1P41233 Gm2495-201ENSMUST00000191160 466 ntBASIC11.6□□□□□ -0.55
Abca1P41233 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.6□□□□□ -0.55
Abca1P41233 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Abca1P41233 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Abca1P41233 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.6□□□□□ -0.55
Abca1P41233 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.6□□□□□ -0.55
Abca1P41233 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.6□□□□□ -0.55
Abca1P41233 Gm45331-201ENSMUST00000209868 554 ntBASIC11.6□□□□□ -0.55
Abca1P41233 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Abca1P41233 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Abca1P41233 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.59□□□□□ -0.55
Abca1P41233 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.59□□□□□ -0.55
Abca1P41233 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Abca1P41233 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Abca1P41233 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.59□□□□□ -0.55
Abca1P41233 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms