Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdkn1aP39689 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdkn1aP39689 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdkn1aP39689 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdkn1aP39689 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdkn1aP39689 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.49□□□□□ -0.57
Cdkn1aP39689 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Gm6912-201ENSMUST00000117218 544 ntBASIC11.49□□□□□ -0.57
Cdkn1aP39689 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Gm12138-201ENSMUST00000122180 951 ntBASIC11.49□□□□□ -0.57
Cdkn1aP39689 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.49□□□□□ -0.57
Cdkn1aP39689 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Mir497b-201ENSMUST00000093601 125 ntBASIC11.49□□□□□ -0.57
Cdkn1aP39689 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdkn1aP39689 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.48□□□□□ -0.57
Cdkn1aP39689 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Gm15240-201ENSMUST00000118156 720 ntBASIC11.48□□□□□ -0.57
Cdkn1aP39689 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Gm12341-201ENSMUST00000119724 503 ntBASIC11.48□□□□□ -0.57
Cdkn1aP39689 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Gm29741-201ENSMUST00000192667 421 ntBASIC11.48□□□□□ -0.57
Cdkn1aP39689 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.48□□□□□ -0.57
Cdkn1aP39689 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.48□□□□□ -0.57
Cdkn1aP39689 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdkn1aP39689 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Cdkn1aP39689 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdkn1aP39689 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdkn1aP39689 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms