Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Sox5P35710 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.22■□□□□ 0.03
Sox5P35710 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sox5P35710 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Sox5P35710 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sox5P35710 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.21■□□□□ 0.03
Sox5P35710 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sox5P35710 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.21■□□□□ 0.03
Sox5P35710 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Sox5P35710 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sox5P35710 Gm6222-201ENSMUST00000120787 396 ntBASIC15.21■□□□□ 0.03
Sox5P35710 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.21■□□□□ 0.03
Sox5P35710 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.21■□□□□ 0.03
Sox5P35710 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.21■□□□□ 0.03
Sox5P35710 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.21■□□□□ 0.03
Sox5P35710 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.21■□□□□ 0.03
Sox5P35710 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.21■□□□□ 0.03
Sox5P35710 Gm10175-201ENSMUST00000086013 645 ntBASIC15.21■□□□□ 0.03
Sox5P35710 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Sox5P35710 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.21■□□□□ 0.03
Sox5P35710 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox5P35710 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sox5P35710 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sox5P35710 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox5P35710 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sox5P35710 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.21■□□□□ 0.02
Sox5P35710 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sox5P35710 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox5P35710 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Sox5P35710 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sox5P35710 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sox5P35710 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.2■□□□□ 0.02
Sox5P35710 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Gm25925-201ENSMUST00000158314 306 ntBASIC15.2■□□□□ 0.02
Sox5P35710 AA543401-201ENSMUST00000164248 1269 ntBASIC15.2■□□□□ 0.02
Sox5P35710 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Sox5P35710 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Sox5P35710 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sox5P35710 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox5P35710 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sox5P35710 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox5P35710 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox5P35710 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox5P35710 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.19■□□□□ 0.02
Sox5P35710 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.19■□□□□ 0.02
Sox5P35710 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox5P35710 Gm13015-201ENSMUST00000118674 204 ntBASIC15.19■□□□□ 0.02
Sox5P35710 Gm11745-201ENSMUST00000121669 448 ntBASIC15.19■□□□□ 0.02
Sox5P35710 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms