Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.02□□□□□ -0.65
Rom1P32958 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Rom1P32958 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Rom1P32958 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Rom1P32958 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rom1P32958 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44357-201ENSMUST00000195897 142 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm19658-201ENSMUST00000196231 138 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44367-201ENSMUST00000196836 138 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44350-201ENSMUST00000197197 138 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44390-201ENSMUST00000197533 144 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44313-201ENSMUST00000198018 138 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44486-201ENSMUST00000198508 138 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44314-201ENSMUST00000199263 138 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44394-201ENSMUST00000199558 138 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44484-201ENSMUST00000199873 138 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44466-201ENSMUST00000200264 138 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Gm44359-201ENSMUST00000200671 138 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.02□□□□□ -0.65
Rom1P32958 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rom1P32958 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rom1P32958 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.02□□□□□ -0.65
Rom1P32958 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Rom1P32958 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Rom1P32958 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rom1P32958 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.02□□□□□ -0.65
Rom1P32958 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rom1P32958 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.02□□□□□ -0.65
Rom1P32958 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rom1P32958 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rom1P32958 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.01□□□□□ -0.65
Rom1P32958 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rom1P32958 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Rom1P32958 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rom1P32958 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.01□□□□□ -0.65
Rom1P32958 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Gm10252-201ENSMUST00000209541 832 ntBASIC11.01□□□□□ -0.65
Rom1P32958 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rom1P32958 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.01□□□□□ -0.65
Rom1P32958 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.01□□□□□ -0.65
Rom1P32958 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.01□□□□□ -0.65
Rom1P32958 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rom1P32958 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11□□□□□ -0.65
Rom1P32958 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rom1P32958 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rom1P32958 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rom1P32958 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rom1P32958 Gm20632-201ENSMUST00000176760 2427 ntBASIC11□□□□□ -0.65
Rom1P32958 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms