Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Mmp3P28862 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Mmp3P28862 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.88□□□□□ -0.03
Mmp3P28862 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.88□□□□□ -0.03
Mmp3P28862 Gm6983-201ENSMUST00000214912 628 ntBASIC14.88□□□□□ -0.03
Mmp3P28862 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.88□□□□□ -0.03
Mmp3P28862 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.88□□□□□ -0.03
Mmp3P28862 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.88□□□□□ -0.03
Mmp3P28862 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.88□□□□□ -0.03
Mmp3P28862 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp3P28862 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Mmp3P28862 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Mmp3P28862 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Mmp3P28862 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.87□□□□□ -0.03
Mmp3P28862 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.87□□□□□ -0.03
Mmp3P28862 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Gm7287-201ENSMUST00000205267 602 ntBASIC14.87□□□□□ -0.03
Mmp3P28862 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Mmp3P28862 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.87□□□□□ -0.03
Mmp3P28862 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp3P28862 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.86□□□□□ -0.03
Mmp3P28862 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Mmp3P28862 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Mmp3P28862 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Mmp3P28862 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Mmp3P28862 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Gm11425-201ENSMUST00000119608 498 ntBASIC14.86□□□□□ -0.03
Mmp3P28862 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.86□□□□□ -0.03
Mmp3P28862 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
Mmp3P28862 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Gm2445-201ENSMUST00000182798 989 ntBASIC14.86□□□□□ -0.03
Mmp3P28862 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.86□□□□□ -0.03
Mmp3P28862 Gm9396-201ENSMUST00000076703 567 ntBASIC14.86□□□□□ -0.03
Mmp3P28862 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.86□□□□□ -0.03
Mmp3P28862 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.86□□□□□ -0.03
Mmp3P28862 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp3P28862 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.85□□□□□ -0.03
Mmp3P28862 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.85□□□□□ -0.03
Mmp3P28862 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Mmp3P28862 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Mmp3P28862 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms