Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.42□□□□□ -0.42
P20040 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Gm13464-201ENSMUST00000119418 935 ntBASIC12.41□□□□□ -0.42
P20040 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.41□□□□□ -0.42
P20040 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.41□□□□□ -0.42
P20040 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.41□□□□□ -0.42
P20040 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.41□□□□□ -0.42
P20040 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Gm10253-201ENSMUST00000194270 940 ntBASIC12.41□□□□□ -0.42
P20040 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.41□□□□□ -0.42
P20040 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.41□□□□□ -0.42
P20040 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
P20040 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
P20040 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.41□□□□□ -0.42
P20040 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
P20040 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
P20040 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P20040 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
P20040 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.4□□□□□ -0.42
P20040 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.4□□□□□ -0.42
P20040 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P20040 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P20040 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P20040 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.4□□□□□ -0.42
P20040 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.4□□□□□ -0.42
P20040 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
P20040 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.4□□□□□ -0.42
P20040 Gm15920-201ENSMUST00000118998 402 ntBASIC12.4□□□□□ -0.42
P20040 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Gm7774-201ENSMUST00000200064 533 ntBASIC12.4□□□□□ -0.42
P20040 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.4□□□□□ -0.42
P20040 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.4□□□□□ -0.42
P20040 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.4□□□□□ -0.42
P20040 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
P20040 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P20040 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
P20040 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
P20040 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
P20040 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 Mir449b-201ENSMUST00000104833 80 ntBASIC12.39□□□□□ -0.43
P20040 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.39□□□□□ -0.43
P20040 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.39□□□□□ -0.43
P20040 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P20040 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.39□□□□□ -0.43
P20040 Gm18041-201ENSMUST00000218210 618 ntBASIC12.39□□□□□ -0.43
P20040 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms