Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.32□□□□□ -0.12
Rb1P13405 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rb1P13405 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rb1P13405 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rb1P13405 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rb1P13405 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rb1P13405 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rb1P13405 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rb1P13405 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.31□□□□□ -0.12
Rb1P13405 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.31□□□□□ -0.12
Rb1P13405 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.31□□□□□ -0.12
Rb1P13405 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.31□□□□□ -0.12
Rb1P13405 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.31□□□□□ -0.12
Rb1P13405 Gm46209-201ENSMUST00000217912 553 ntBASIC14.31□□□□□ -0.12
Rb1P13405 Gm16476-201ENSMUST00000221544 139 ntBASIC14.31□□□□□ -0.12
Rb1P13405 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Rb1P13405 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rb1P13405 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rb1P13405 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rb1P13405 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Rb1P13405 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.3□□□□□ -0.12
Rb1P13405 Mir1897-201ENSMUST00000122581 272 ntBASIC14.3□□□□□ -0.12
Rb1P13405 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.3□□□□□ -0.12
Rb1P13405 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.3□□□□□ -0.12
Rb1P13405 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Gm45098-201ENSMUST00000207179 657 ntBASIC14.3□□□□□ -0.12
Rb1P13405 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.3□□□□□ -0.12
Rb1P13405 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rb1P13405 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rb1P13405 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.3□□□□□ -0.12
Rb1P13405 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rb1P13405 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rb1P13405 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rb1P13405 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rb1P13405 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rb1P13405 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.29□□□□□ -0.12
Rb1P13405 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rb1P13405 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.29□□□□□ -0.12
Rb1P13405 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rb1P13405 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rb1P13405 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rb1P13405 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rb1P13405 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rb1P13405 Gm11478-201ENSMUST00000117851 599 ntBASIC14.29□□□□□ -0.12
Rb1P13405 Gm4875-201ENSMUST00000118257 786 ntBASIC14.29□□□□□ -0.12
Rb1P13405 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rb1P13405 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.29□□□□□ -0.12
Rb1P13405 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Rb1P13405 Gm18018-201ENSMUST00000198273 408 ntBASIC14.29□□□□□ -0.12
Rb1P13405 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.29□□□□□ -0.12
Rb1P13405 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms