Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
UbbP0CG49 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.13□□□□□ -0.47
UbbP0CG49 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.13□□□□□ -0.47
UbbP0CG49 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.13□□□□□ -0.47
UbbP0CG49 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.13□□□□□ -0.47
UbbP0CG49 Gm15483-201ENSMUST00000120338 456 ntBASIC12.13□□□□□ -0.47
UbbP0CG49 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
UbbP0CG49 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Gm44608-201ENSMUST00000206827 855 ntBASIC12.13□□□□□ -0.47
UbbP0CG49 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.13□□□□□ -0.47
UbbP0CG49 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
UbbP0CG49 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
UbbP0CG49 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
UbbP0CG49 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
UbbP0CG49 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.13□□□□□ -0.47
UbbP0CG49 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
UbbP0CG49 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UbbP0CG49 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Grk6-205ENSMUST00000224653 2976 ntBASIC12.12□□□□□ -0.47
UbbP0CG49 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
UbbP0CG49 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
UbbP0CG49 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.12□□□□□ -0.47
UbbP0CG49 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
UbbP0CG49 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
UbbP0CG49 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.12□□□□□ -0.47
UbbP0CG49 Gm11543-201ENSMUST00000120758 370 ntBASIC12.12□□□□□ -0.47
UbbP0CG49 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.12□□□□□ -0.47
UbbP0CG49 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
UbbP0CG49 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.12□□□□□ -0.47
UbbP0CG49 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.12□□□□□ -0.47
UbbP0CG49 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
UbbP0CG49 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
UbbP0CG49 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.12□□□□□ -0.47
UbbP0CG49 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
UbbP0CG49 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.12□□□□□ -0.47
UbbP0CG49 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.12□□□□□ -0.47
UbbP0CG49 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UbbP0CG49 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.11□□□□□ -0.47
UbbP0CG49 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
UbbP0CG49 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
UbbP0CG49 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
UbbP0CG49 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.11□□□□□ -0.47
UbbP0CG49 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UbbP0CG49 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.11□□□□□ -0.47
UbbP0CG49 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.11□□□□□ -0.47
UbbP0CG49 Gm9385-201ENSMUST00000117563 472 ntBASIC12.11□□□□□ -0.47
UbbP0CG49 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.11□□□□□ -0.47
UbbP0CG49 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
UbbP0CG49 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms